An Evolutionary Portrait of the Progenitor SARS-CoV-2 and its Dominant Offshoots in COVID-19 Pandemic

Molecular Biology and Evolution | (In press):(https://doi.org/10.1093/molbev/msab118)

S. Kumar, Q. Tao, S. Weaver, M. Sanderford, M. A. Caraballo-Ortiz, S. Sharma, S. L. K. Pond, S. Miura

Epistasis Produces an Excess of Invariant Sites in Neutral Molecular Evolution

Proceedings of the National Academy of Sciences (USA) | 118:e2018767118

R. Patel and S. Kumar

MEGA11: Molecular Evolutionary Genetics Analysis version 11

Molecular Biology and Evolution | (Accepted):(https://doi.org/10.1093/molbev/msab120)

K. Tamura, G. Stecher, S. Kumar

Molecular Dating for Phylogenies Containing a Mix of Populations and Species by Using Bayesian and RelTime Approaches

Molecular Ecology Resources | 21:122–136

B. Mello, Q. Tao, J. Barba-Montoya, S. Kumar

How to Build a Super Predator: From Genotype to Phenotype

The American Biology Teacher | 83:138–146

C. Babaian, S. Kumar

Data-driven Speciation Tree Prior for Better Species Divergence Times in Calibration-poor Molecular Phylogenies

Bioinformatics | (Accepted):(https://doi.org/10.1101/2021.03.27.437326)

Q. Tao, J. Barba-Montoya, S. Kumar

Common Treatment, Common Variant: Evolutionary Prediction of Functional Pharmacogenomic Variants

Journal of Personalized Medicine | 11:131 (13 pp)

L. B. Scheinfeldt, A. Brangan, D. Kusic, S. Kumar, N. Gharani

TreeMap: A Structured Approach to Fine Mapping of eQTL Variants

Bioinformatics | (In press):(https://doi.org/10.1101/2020.05.31.125880)

L. Liu, P. Chandrashekar, B. Zeng, M. D. Sanderford, S. Kumar, G. Gibson

Phylomedicine of Mutational Processes in Somatic Cancer Cell Populations

eLife | (In review):(https://doi.org/10.1101/2021.04.02.438268)

S. Miura, T. Vu, J. Choi, S. Kumar

Molecular and Morphological Clocks for Estimating Evolutionary Divergence Times

BMC Ecology and Evolution | 21:(https://doi.org/10.1186/s12862-021-01798-6)

J. Barba-Montoya, Q. Tao, S. Kumar